Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911406.1_cds_XP_016461386.1_54712
CDS Infomation

[gene=LOC107784728] [db_xref=GeneID:107784728] [protein=high affinity nitrate transporter 2.4-like] [protein_id=XP_016461386.1] [location=join(42349..43170,43268..43383,44004..44670)] [gbkey=CDS]
Sequence

ATGGCTAATTTTGAAAGTCCCCTAGGTAGCTCAGTGCATGGATTAACTGGCAAAGAACAA
ACATTTGCATTTTCTGTTTCTTCACATAGCCATAATAATCCTGATAATAAGAGCCTAGCC
ACAAAATTTGATTTGCCAGTTGATTCAGAGCACAAGGCAAAAGCTATAAAAATCTTCTCA
TTTGCACAACCCCACATGAGATCTTTTCACTTAGCCTGGATTTCGTTTTTCGCTTGTTTC
ATCTCCACTTTTGCTGCTGCTCCTTTAGTTCCCATTATTCGCGATAATCTTAACCTAACG
AGAGCAGATATTGGCAATGCCGGGGTTGCTTCTGTGTCTGGTAGCATTTTCTCTAGGCTA
GTAATGGGTGTACTATGTGACTTAATAGGTCCAAGATATGGCTGTGCATTTCTCAACCTT
TTAACAGCCCCTATTGTTTTCTCTGTGGCTTTTGTCTCAAATGCAGAAGGATATTTAGCT
ATGAGATTTTTAGTGGGATTTTCATTAGCCACATTTGTGTCATGCCAATACTGGACTAGT
GTAATGTTTAATAGCCAGATTATTGGACTTGTTAATGGTGTTGCAGGGGGGTGGGGTGAT
ATGGGGGGTGGTGTTACTCAACTCCTTATGCCTTTTCTTTTTCATATAATTAAAATAACT
GGAGCTACTCCATTTACAGCGTGGCGTATCGCCTTTTTTATACCAGGATGGTTACATATT
ATAATAGGACTTATGGTCTTAACTCTTGGTCAAGATTTCCCTGATGGTAACCTTAGTACT
CTACAGAAAAGGGGTGATGTTGCCAAAGATCAATTTTCAAAGGTTCTTCGGTATGCAGTG
ACAAATTATAGGACATGGGTCTTCTTCCTCCTCTATGGATTTTCCATGGGAGTTGAGCTT
TGCATCAACAATGTCATAGCAGAATATTTTTACGACAAGTTTAATCTGAAGCTACACACA
GCAGGAATGATAGCTGCAACATTTGGAATGGCCAATTTTGTGGCACGTCCATTTGGAGGA
TATGCATCTGATTTAGCAGCAAGAAAATTCGGAATGAGAGGCAGGTTATGGGTCCTATGG
ATAGTGCAAACATTAGGAGGAGCCTTCTGTATTTGGTTGGGCCGAGCCGAATCTCTTCCT
ATAGCCATAGTTTCAATGATTCTCTTCTCAATCGGAGCTCAAGCTGCATGTGGTGCAACT
TATGGAATCATTCCTTTCGTTTCGCGAAGATCGTTGGGCTTGATTTCAGGCCTCACTGGT
GCTGGAGGAAATTTTGGAGGGGGCTTAACACAATTGCTTTTCTTTTCAACGACAAGATTT
TCGACAGCAATGGGACTAACTTGGATGGGAGTAATGGCCGTGGCTTGTACAATACCAGTT
GCTTTTATTCATTTTCCGCAGTGGGGAAGTATGTTTTTTCCAGCTTCAAAAGATGGGAAA
TATGATGAAGAGCATTATTATGGTTCAGAATGGACAGAAGATGAAAAATCAAAAGGATTA
CATCAGGGAAGTGTTAAATTTGCAGAGAATTGCCGATCTGAACGTGGGAAAAAACATATT
GTTTCTTCCTTAGATACTCCACCTTACTCTCCAGAACATGTTTGA

Peptide Sequence

PEP ID

XP_016461386.1
PEP Infomation

PREDICTED: high affinity nitrate transporter 2.4-like [Nicotiana tabacum]
Sequence

MANFESPLGSSVHGLTGKEQTFAFSVSSHSHNNPDNKSLATKFDLPVDSEHKAKAIKIFS
FAQPHMRSFHLAWISFFACFISTFAAAPLVPIIRDNLNLTRADIGNAGVASVSGSIFSRL
VMGVLCDLIGPRYGCAFLNLLTAPIVFSVAFVSNAEGYLAMRFLVGFSLATFVSCQYWTS
VMFNSQIIGLVNGVAGGWGDMGGGVTQLLMPFLFHIIKITGATPFTAWRIAFFIPGWLHI
IIGLMVLTLGQDFPDGNLSTLQKRGDVAKDQFSKVLRYAVTNYRTWVFFLLYGFSMGVEL
CINNVIAEYFYDKFNLKLHTAGMIAATFGMANFVARPFGGYASDLAARKFGMRGRLWVLW
IVQTLGGAFCIWLGRAESLPIAIVSMILFSIGAQAACGATYGIIPFVSRRSLGLISGLTG
AGGNFGGGLTQLLFFSTTRFSTAMGLTWMGVMAVACTIPVAFIHFPQWGSMFFPASKDGK
YDEEHYYGSEWTEDEKSKGLHQGSVKFAENCRSERGKKHIVSSLDTPPYSPEHV

Transcript Sequence

Gene sequence data has not been registered.